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» A Generalization of Automatic Sequences
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JCB
2006
215views more  JCB 2006»
15 years 7 months ago
Protein Fold Recognition Using Segmentation Conditional Random Fields (SCRFs)
Protein fold recognition is an important step towards understanding protein three-dimensional structures and their functions. A conditional graphical model, i.e., segmentation con...
Yan Liu 0002, Jaime G. Carbonell, Peter Weigele, V...
SIGMOD
2008
ACM
140views Database» more  SIGMOD 2008»
15 years 7 months ago
Near-optimal algorithms for shared filter evaluation in data stream systems
We consider the problem of evaluating multiple overlapping queries defined on data streams, where each query is a conjunction of multiple filters and each filter may be shared acr...
Zhen Liu, Srinivasan Parthasarathy 0002, Anand Ran...
ALGORITHMICA
2002
84views more  ALGORITHMICA 2002»
15 years 7 months ago
On-Line Multi-Threaded Paging
In this paper we introduce a generalization of Paging to the case where there are many threads of requests. This models situations in which the requests come from more than one ind...
Esteban Feuerstein, Alejandro Strejilevich de Loma
BMCBI
2004
98views more  BMCBI 2004»
15 years 7 months ago
STING Millennium Suite: integrated software for extensive analyses of 3d structures of proteins and their complexes
Background: The integration of many aspects of protein/DNA structure analysis is an important requirement for software products in general area of structural bioinformatics. In fa...
Roberto H. Higa, Roberto C. Togawa, Arnaldo J. Mon...
JACM
2000
131views more  JACM 2000»
15 years 7 months ago
The soft heap: an approximate priority queue with optimal error rate
A simple variant of a priority queue, called a soft heap, is introduced. The data structure supports the usual operations: insert, delete, meld, and findmin. Its novelty is to beat...
Bernard Chazelle