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BMCBI
2010
183views more  BMCBI 2010»
15 years 7 months ago
SOPRA: Scaffolding algorithm for paired reads via statistical optimization
Background: High throughput sequencing (HTS) platforms produce gigabases of short read (<100 bp) data per run. While these short reads are adequate for resequencing application...
Adel Dayarian, Todd P. Michael, Anirvan M. Sengupt...
FSTTCS
2009
Springer
16 years 4 days ago
Bounded Size Graph Clustering with Applications to Stream Processing
We introduce a graph clustering problem motivated by a stream processing application. Input to our problem is an undirected graph with vertex and edge weights. A cluster is a subse...
Rohit Khandekar, Kirsten Hildrum, Sujay Parekh, De...
ICSE
2001
IEEE-ACM
15 years 12 months ago
JMOCHA: A Model Checking Tool that Exploits Design Structure
Mocha is a model checker based on the theme of exploiting design modularity: instead of manipulating unstructured state-transition graphs, it supports the hierarchical modeling fra...
Rajeev Alur, Luca de Alfaro, Radu Grosu, Thomas A....
PPDP
1999
Springer
15 years 11 months ago
A Calculus for Interaction Nets
hemical abstract machine Shinya Sato Himeji Dokkyo University, Faculty of Econoinformatics, 7-2-1 Kamiohno, Himeji-shi, Hyogo 670-8524, Japan Ian Mackie LIX, CNRS UMR 7161, ´Ecole...
Maribel Fernández, Ian Mackie
ICCAD
1994
IEEE
121views Hardware» more  ICCAD 1994»
15 years 11 months ago
A cell-based power estimation in CMOS combinational circuits
In this paper we present a power dissipation model considering the charging/discharging of capacitance at the gate output node as well as internal nodes, and capacitance feedthrou...
Jiing-Yuan Lin, Tai-Chien Liu, Wen-Zen Shen