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BMCBI
2007
140views more  BMCBI 2007»
15 years 7 months ago
From genes to functional classes in the study of biological systems
Background: With the popularisation of high-throughput techniques, the need for procedures that help in the biological interpretation of results has increased enormously. Recently...
Fátima Al-Shahrour, Leonardo Arbiza, Hern&a...
BMCBI
2010
198views more  BMCBI 2010»
15 years 7 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
BMCBI
2007
233views more  BMCBI 2007»
15 years 7 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
BMCBI
2008
132views more  BMCBI 2008»
15 years 7 months ago
Clustering ionic flow blockade toggles with a Mixture of HMMs
Background: Ionic current blockade signal processing, for use in nanopore detection, offers a promising new way to analyze single molecule properties with potential implications f...
Alexander G. Churbanov, Stephen Winters-Hilt
COMCOM
2008
153views more  COMCOM 2008»
15 years 7 months ago
Available bandwidth estimation and admission control for QoS routing in wireless mesh networks
This article presents an integrated admission control and routing mechanism for multi-rate wireless mesh networks. Admission control depends on precise estimates of available band...
Mesut Ali Ergin, Marco Gruteser, Lin Luo, Dipankar...
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