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BMCBI
2006
205views more  BMCBI 2006»
15 years 7 months ago
Application of Petri net based analysis techniques to signal transduction pathways
Background: Signal transduction pathways are usually modelled using classical quantitative methods, which are based on ordinary differential equations (ODEs). However, some diffic...
Andrea Sackmann, Monika Heiner, Ina Koch
BMCBI
2006
113views more  BMCBI 2006»
15 years 7 months ago
QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyp
Background: Single nucleotide polymorphisms (SNPs) are important tools in studying complex genetic traits and genome evolution. Computational strategies for SNP discovery make use...
Jifeng Tang, Ben Vosman, Roeland E. Voorrips, C. G...
CORR
2006
Springer
141views Education» more  CORR 2006»
15 years 7 months ago
Ideas by Statistical Mechanics (ISM)
Ideas by Statistical Mechanics (ISM) is a generic program to model evolution and propagation of ideas/patterns throughout populations subjected to endogenous and exogenous interac...
Lester Ingber
BMCBI
2007
126views more  BMCBI 2007»
15 years 7 months ago
Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation
Background: Biochemical investigations over the last decades have elucidated an increasingly complete image of the cellular metabolism. To derive a systems view for the regulation...
Gunnar Schramm, Marc Zapatka, Roland Eils, Rainer ...
FGCS
2006
111views more  FGCS 2006»
15 years 7 months ago
Collaborative data visualization for Earth Sciences with the OptIPuter
Collaborative visualization of large-scale datasets across geographically distributed sites is becoming increasingly important for Earth Sciences. Not only does it enhance our und...
Nut Taesombut, Xinran (Ryan) Wu, Andrew A. Chien, ...
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