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DEXA
2009
Springer
188views Database» more  DEXA 2009»
15 years 11 months ago
On-the-Fly Integration and Ad Hoc Querying of Life Sciences Databases Using LifeDB
Data intensive applications in Life Sciences extensively use the Hidden Web as a platform for information sharing. Access to these heterogeneous Hidden Web resources is limited thr...
Anupam Bhattacharjee, Aminul Islam, Mohammad Shafk...
BMCBI
2010
138views more  BMCBI 2010»
15 years 7 months ago
A database and API for variation, dense genotyping and resequencing data
Background: Advances in sequencing and genotyping technologies are leading to the widespread availability of multi-species variation data, dense genotype data and large-scale rese...
Daniel Rios, William M. McLaren, Yuan Chen, Ewan B...
BMCBI
2008
153views more  BMCBI 2008»
15 years 7 months ago
2DB: a Proteomics database for storage, analysis, presentation, and retrieval of information from mass spectrometric experiments
Background: The amount of information stemming from proteomics experiments involving (multi dimensional) separation techniques, mass spectrometric analysis, and computational anal...
Jens Allmer, Sebastian Kuhlgert, Michael Hippler
BMCBI
2005
116views more  BMCBI 2005»
15 years 7 months ago
SuperLigands - a database of ligand structures derived from the Protein Data Bank
Background: Currently, the PDB contains approximately 29,000 protein structures comprising over 70,000 experimentally determined three-dimensional structures of over 5,000 differe...
Elke Michalsky, Mathias Dunkel, Andrean Goede, Rob...
BMCBI
2002
137views more  BMCBI 2002»
15 years 7 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert