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BMCBI
2007
142views more  BMCBI 2007»
15 years 7 months ago
Predicting and improving the protein sequence alignment quality by support vector regression
Background: For successful protein structure prediction by comparative modeling, in addition to identifying a good template protein with known structure, obtaining an accurate seq...
Minho Lee, Chan-seok Jeong, Dongsup Kim
JCC
2006
110views more  JCC 2006»
15 years 7 months ago
Using internal and collective variables in Monte Carlo simulations of nucleic acid structures: Chain breakage/closure algorithm
: This article describes a method for solving the geometric closure problem for simplified models of nucleic acid structures by using the constant bond lengths approximation. The r...
Heinz Sklenar, Daniel Wüstner, Remo Rohs
177
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ENTCS
2007
97views more  ENTCS 2007»
15 years 7 months ago
Safety-Oriented Design of Component Assemblies using Safety Interfaces
This paper promotes compositional reasoning in the context of safety-critical systems, and demonstrates a safety-oriented component model using an application from the automotive ...
Jonas Elmqvist, Simin Nadjm-Tehrani
NLE
2008
118views more  NLE 2008»
15 years 7 months ago
Part-of-speech tagging of Modern Hebrew text
Words in Semitic texts often consist of a concatenation of word segments, each corresponding to a Part-of-Speech (POS) category. Semitic words may be ambiguous with regard to thei...
Roy Bar-Haim, Khalil Sima'an, Yoad Winter
BMCBI
2005
118views more  BMCBI 2005»
15 years 6 months ago
Vestige: Maximum likelihood phylogenetic footprinting
Background: Phylogenetic footprinting is the identification of functional regions of DNA by their evolutionary conservation. This is achieved by comparing orthologous regions from...
Matthew J. Wakefield, Peter Maxwell, Gavin A. Hutt...
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