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» Algorithms and Data Structures for Computer Topology
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BMCBI
2010
189views more  BMCBI 2010»
15 years 7 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
KDD
2005
ACM
165views Data Mining» more  KDD 2005»
16 years 7 months ago
Co-clustering by block value decomposition
Dyadic data matrices, such as co-occurrence matrix, rating matrix, and proximity matrix, arise frequently in various important applications. A fundamental problem in dyadic data a...
Bo Long, Zhongfei (Mark) Zhang, Philip S. Yu
NN
2002
Springer
115views Neural Networks» more  NN 2002»
15 years 6 months ago
A self-organising network that grows when required
The ability to grow extra nodes is a potentially useful facility for a self-organising neural network. A network that can add nodes into its map space can approximate the input sp...
Stephen Marsland, Jonathan Shapiro, Ulrich Nehmzow
BMCBI
2006
239views more  BMCBI 2006»
15 years 7 months ago
Applying dynamic Bayesian networks to perturbed gene expression data
Background: A central goal of molecular biology is to understand the regulatory mechanisms of gene transcription and protein synthesis. Because of their solid basis in statistics,...
Norbert Dojer, Anna Gambin, Andrzej Mizera, Bartek...
EWSN
2010
Springer
16 years 8 days ago
Wiselib: A Generic Algorithm Library for Heterogeneous Sensor Networks
One unfortunate consequence of the success story of wireless sensor networks (WSNs) in separate research communities is an evergrowing gap between theory and practice. Even though ...
Tobias Baumgartner, Ioannis Chatzigiannakis, S&aac...