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» Aligning Alignments
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IPPS
2006
IEEE
16 years 1 months ago
A method to improve structural modeling based on conserved domain clusters
—Homology modeling requires an accurate alignment between a query sequence and its homologs with known three-dimensional (3D) information. Current structural modeling techniques ...
Fa Zhang, Lin Xu, Bo Yuan
BMCBI
2004
126views more  BMCBI 2004»
15 years 7 months ago
A probabilistic model for the evolution of RNA structure
Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
Ian Holmes
HPDC
2010
IEEE
15 years 8 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
BMCBI
2007
233views more  BMCBI 2007»
15 years 7 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
195
Voted
ICPR
2006
IEEE
16 years 8 months ago
An Experimental Study on Automatic Face Gender Classification
This paper presents an experimental study on automatic face gender classification by building a system that mainly consists of four parts, face detection, face alignment, texture ...
Haizhou Ai, Ming Li, Zhiguang Yang