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BMCBI
2008
178views more  BMCBI 2008»
15 years 7 months ago
A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic ana
Background: Protein remote homology detection and fold recognition are central problems in bioinformatics. Currently, discriminative methods based on support vector machine (SVM) ...
Bin Liu, Xiaolong Wang, Lei Lin, Qiwen Dong, Xuan ...
BMCBI
2008
142views more  BMCBI 2008»
15 years 7 months ago
Strategies for measuring evolutionary conservation of RNA secondary structures
Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
Andreas R. Gruber, Stephan H. F. Bernhart, Ivo L. ...
CPHYSICS
2008
96views more  CPHYSICS 2008»
15 years 7 months ago
Moment distributions of clusters and molecules in the adiabatic rotor model
We present a Fortran program to compute the distribution of dipole moments of free particles for use in analyzing molecular beams experiments that measure moments by deflection in...
G. E. Ballentine, G. F. Bertsch, N. Onishi, K. Yab...
EC
2008
116views ECommerce» more  EC 2008»
15 years 7 months ago
Efficient Evaluation Functions for Evolving Coordination
Abstract-- This paper presents a method for creating evaluation functions that efficiently promote coordination in a multiagent system, allowing single-agent evolutionary computati...
Adrian K. Agogino, Kagan Tumer
ENGL
2008
78views more  ENGL 2008»
15 years 7 months ago
Threshold for Positional Weight Matrix
In biological sequence research, the positional weight matrix (PWM) is often used to search for putative transcription factor binding sites. A set of experimentally verified oligon...
Yunlian Pan, Sieu Phan