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BMCBI
2008
103views more  BMCBI 2008»
15 years 7 months ago
Parameter estimation for robust HMM analysis of ChIP-chip data
Background: Tiling arrays are an important tool for the study of transcriptional activity, proteinDNA interactions and chromatin structure on a genome-wide scale at high resolutio...
Peter Humburg, David Bulger, Glenn Stone
IPPS
2007
IEEE
16 years 1 months ago
Probability Convergence in a Multithreaded Counting Application
The problem of counting specified combinations of a given set of variables arises in many statistical and data mining applications. To solve this problem, we introduce the PDtree...
Chad Scherrer, Nathaniel Beagley, Jarek Nieplocha,...
BIRD
2008
Springer
141views Bioinformatics» more  BIRD 2008»
15 years 9 months ago
Nested q-Partial Graphs for Genetic Network Inference from "Small n, Large p" Microarray Data
Abstract. Gaussian graphical models are widely used to tackle the important and challenging problem of inferring genetic regulatory networks from expression data. These models have...
Kevin Kontos, Gianluca Bontempi
CIKM
2006
Springer
15 years 11 months ago
3DString: a feature string kernel for 3D object classification on voxelized data
Classification of 3D objects remains an important task in many areas of data management such as engineering, medicine or biology. As a common preprocessing step in current approac...
Johannes Aßfalg, Karsten M. Borgwardt, Hans-...
SIGMOD
2008
ACM
107views Database» more  SIGMOD 2008»
16 years 7 months ago
Outlier-robust clustering using independent components
How can we efficiently find a clustering, i.e. a concise description of the cluster structure, of a given data set which contains an unknown number of clusters of different shape ...
Christian Böhm, Christos Faloutsos, Claudia P...