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CLEF
2006
Springer
15 years 11 months ago
CLEF-2006 CL-SR at Maryland: English and Czech
The University of Maryland participated in the English and Czech tasks. For English, one monolingual run using only fields based on fully automatic transcription (the required con...
Jianqiang Wang, Douglas W. Oard
BMCBI
2010
154views more  BMCBI 2010»
15 years 7 months ago
LINNAEUS: A species name identification system for biomedical literature
Background: The task of recognizing and identifying species names in biomedical literature has recently been regarded as critical for a number of applications in text and data min...
Martin Gerner, Goran Nenadic, Casey M. Bergman
BMCBI
2007
145views more  BMCBI 2007»
15 years 7 months ago
Colony size measurement of the yeast gene deletion strains for functional genomics
Background: Numerous functional genomics approaches have been developed to study the model organism yeast, Saccharomyces cerevisiae, with the aim of systematically understanding t...
Negar Memarian, Matthew Jessulat, Javad Alirezaie,...
BMCBI
2008
135views more  BMCBI 2008»
15 years 7 months ago
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining
Background: Many bioinformatics applications rely on controlled vocabularies or ontologies to consistently interpret and seamlessly integrate information scattered across public r...
Irena Spasic, Daniel Schober, Susanna-Assunta Sans...
BMCBI
2006
114views more  BMCBI 2006»
15 years 7 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...