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GCB
2004
Springer
223views Biometrics» more  GCB 2004»
15 years 11 months ago
PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays
: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs. In this paper, we present a new nonheuristic algorithm, ...
Michael Beckstette, Dirk Strothmann, Robert Homann...
VLDB
2000
ACM
121views Database» more  VLDB 2000»
15 years 10 months ago
Fast Time Sequence Indexing for Arbitrary Lp Norms
Fast indexing in time sequence databases for similarity searching has attracted a lot of research recently. Most of the proposals, however, typically centered around the Euclidean...
Byoung-Kee Yi, Christos Faloutsos
NAR
2007
152views more  NAR 2007»
15 years 6 months ago
COMPASS server for remote homology inference
COMPASS is a method for homology detection and local alignment construction based on the comparison of multiple sequence alignments (MSAs). The method derives numerical profiles f...
Ruslan Sadreyev, Ming Tang, Bong-Hyun Kim, Nick V....
ICPR
2000
IEEE
16 years 8 months ago
A Weighted Distance Approach to Relevance Feedback
Content-based image retrievalsystems use low-levelfeatures like color and texturefor image representation. Given these representationsasfeature vectors, similarity between images ...
Selim Aksoy, Robert M. Haralick, Faouzi Alaya Chei...
ADBIS
2007
Springer
117views Database» more  ADBIS 2007»
16 years 1 months ago
Improving the Performance of M-Tree Family by Nearest-Neighbor Graphs
The M-tree and its variants have been proved to provide an efficient similarity search in database environments. In order to further improve their performance, in this paper we pro...
Tomás Skopal, David Hoksza