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BMCBI
2006
166views more  BMCBI 2006»
15 years 7 months ago
Extraction of phylogenetic network modules from the metabolic network
Background: In bio-systems, genes, proteins and compounds are related to each other, thus forming complex networks. Although each organism has its individual network, some organis...
Takuji Yamada, Minoru Kanehisa, Susumu Goto
CIBCB
2005
IEEE
16 years 19 days ago
Functional Distances for Genes Based on GO Feature Maps and their Application to Clustering
— With the invention of high throughput methods, researchers are capable of producing large amounts of biological data. During the analysis of such data, the need for a functiona...
Nora Speer, Holger Fröhlich, Christian Spieth...
ACSD
2008
IEEE
130views Hardware» more  ACSD 2008»
16 years 1 months ago
BAM: BioAmbient machine
In recent years it has become clear that techniques developed for concurrent programming are in fact very useful for the analysis of complex systems in biology. To some level of i...
Vinod A. Muganthan, Andrew Phillips, Maria Grazia ...
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DIS
2007
Springer
16 years 1 months ago
Literature-Based Discovery by an Enhanced Information Retrieval Model
The massive, ever-growing literature in life science makes it increasingly difficult for individuals to grasp all the information relevant to their interests. Since even experts’...
Kazuhiro Seki, Javed Mostafa
ICANN
2007
Springer
16 years 1 months ago
Structure Learning with Nonparametric Decomposable Models
Abstract. We present a novel approach to structure learning for graphical models. By using nonparametric estimates to model clique densities in decomposable models, both discrete a...
Anton Schwaighofer, Mathäus Dejori, Volker Tr...