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» Computation in Gene Networks
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193
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IJFCS
2008
102views more  IJFCS 2008»
15 years 7 months ago
Gene Assembly Models and Boolean Circuits
We propose two different ways to simulate Boolean circuits in the framework of ciliate computations, based on the intramolecular and on the intermolecular gene assembly models wit...
Tseren-Onolt Ishdorj, Ion Petre
261
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RECOMB
2004
Springer
16 years 7 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir
208
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BMCBI
2008
123views more  BMCBI 2008»
15 years 7 months ago
Functional module detection by functional flow pattern mining in protein interaction networks
eraction networks. In this abstract, we extend this approach by mining functional flow patterns for the purpose of detecting small-sized modules for specific functions. Methods Our...
Young-Rae Cho, Lei Shi, Aidong Zhang
194
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ICML
2007
IEEE
16 years 7 months ago
Recovering temporally rewiring networks: a model-based approach
A plausible representation of relational information among entities in dynamic systems such as a living cell or a social community is a stochastic network which is topologically r...
Fan Guo, Steve Hanneke, Wenjie Fu, Eric P. Xing
186
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ADMA
2009
Springer
212views Data Mining» more  ADMA 2009»
16 years 1 months ago
Automating Gene Expression Annotation for Mouse Embryo
It is of high biomedical interest to identify gene interactions and networks that are associated with developmental and physiological functions in the mouse embryo. There are now v...
Liangxiu Han, Jano I. van Hemert, Richard A. Baldo...