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» Computation in Gene Networks
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RECOMB
2001
Springer
16 years 7 months ago
Context-specific Bayesian clustering for gene expression data
The recent growth in genomic data and measurements of genome-wide expression patterns allows us to apply computational tools to examine gene regulation by transcription factors. I...
Yoseph Barash, Nir Friedman
CBMS
2008
IEEE
16 years 1 months ago
A New Path Length Measure Based on GO for Gene Similarity with Evaluation using SGD Pathways
We propose a new method for measuring the semantic similarity of genes based on path length between their annotation terms in the Gene Ontology. Our method applies an exponential ...
Anurag Nagar, Hisham Al-Mubaid
179
Voted
IPPS
2007
IEEE
16 years 1 months ago
A Flexible Resource Management Architecture for the Blue Gene/P Supercomputer
Blue Gene R /P is a massively parallel supercomputer intended as the successor to Blue Gene/L. It leverages much of the existing architecture of its predecessor to provide scalabi...
Sam Miller, Mark Megerian, Paul Allen, Tom Budnik
245
Voted
JIB
2006
220views more  JIB 2006»
15 years 7 months ago
An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...
171
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DSN
2007
IEEE
16 years 1 months ago
What Supercomputers Say: A Study of Five System Logs
If we hope to automatically detect and diagnose failures in large-scale computer systems, we must study real deployed systems and the data they generate. Progress has been hampere...
Adam J. Oliner, Jon Stearley