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BMCBI
2006
108views more  BMCBI 2006»
15 years 7 months ago
An improved map of conserved regulatory sites for Saccharomyces cerevisiae
Background: The regulatory map of a genome consists of the binding sites for proteins that determine the transcription of nearby genes. An initial regulatory map for S. cerevisiae...
Kenzie D. MacIsaac, Ting Wang, D. Benjamin Gordon,...
BMCBI
2007
137views more  BMCBI 2007»
15 years 7 months ago
PlnTFDB: an integrative plant transcription factor database
Background: Transcription factors (TFs) are key regulatory proteins that enhance or repress the transcriptional rate of their target genes by binding to specific promoter regions ...
Diego Mauricio Riaño-Pachón, Sloboda...
BMCBI
2005
161views more  BMCBI 2005»
15 years 7 months ago
Non-linear mapping for exploratory data analysis in functional genomics
Background: Several supervised and unsupervised learning tools are available to classify functional genomics data. However, relatively less attention has been given to exploratory...
Francisco Azuaje, Haiying Wang, Alban Chesneau
CIBCB
2008
IEEE
16 years 2 months ago
An information theoretic approach for the discovery of irregular and repetitive patterns in genomic data
sequence content at an abstract level and offers novel ways to examine the information contained in them. Our approach is an information theoretic search process which uses patter...
Willard Davis, Ananth Kalyanaraman, Diane J. Cook
ESCIENCE
2006
IEEE
16 years 1 months ago
An Extended Extremal Optimisation Model for Parallel Architectures
: A relatively new meta-heuristic, known as extremal optimisation (EO), is based on the evolutionary science notion that poorly performing genes of an individual are replaced by ra...
Marcus Randall, Andrew Lewis