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210
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ASM
2010
ASM
16 years 1 months ago
A Basis for Feature-Oriented Modelling in Event-B
Abstract. Feature-oriented modelling is a well-known approach for Software Product Line (SPL) development. It is a widely used method when developing groups of related software. Wi...
Jennifer Sorge, Michael Poppleton, Michael Butler
195
Voted
CIBCB
2007
IEEE
16 years 1 months ago
Multiple Sequence Alignment using Fuzzy Logic
—DNA matching is a crucial step in sequence alignment. Since sequence alignment is an approximate matching process there is a need for good approximate algorithms. The process of...
Sara Nasser, Gregory Vert, Monica N. Nicolescu, Al...
ICASSP
2007
IEEE
16 years 1 months ago
Fast Search of Sequences with Complex Symbol Correlations using Profile Context-Sensitive HMMS and Pre-Screening Filters
Recently, profile context-sensitive HMMs (profile-csHMMs) have been proposed which are very effective in modeling the common patterns and motifs in related symbol sequences. Pro...
Byung-Jun Yoon, P. P. Vaidyanathan
169
Voted
SPIRE
2007
Springer
16 years 1 months ago
Approximate String Matching with Lempel-Ziv Compressed Indexes
Abstract. A compressed full-text self-index for a text T is a data structure requiring reduced space and able of searching for patterns P in T. Furthermore, the structure can repro...
Luís M. S. Russo, Gonzalo Navarro, Arlindo ...
CIBCB
2006
IEEE
16 years 1 months ago
Motif Evaluation by Leave-one-out Scoring
Abstract— We propose a new method for collecting information on regulatory elements found by any motif discovery program. We suggest that combining the results of n leave-oneout ...
Audrey Girouard, Noah W. Smith, Donna K. Slonim