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BMCBI
2007
157views more  BMCBI 2007»
15 years 7 months ago
Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory
Background: Large-scale sequencing of entire genomes has ushered in a new age in biology. One of the next grand challenges is to dissect the cellular networks consisting of many i...
Feng Luo, Yunfeng Yang, Jianxin Zhong, Haichun Gao...
236
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CSB
2005
IEEE
189views Bioinformatics» more  CSB 2005»
16 years 22 days ago
Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks
We developed a machine learning system for determining gene functions from heterogeneous sources of data sets using a Weighted Naive Bayesian Network (WNB). The knowledge of gene ...
Xutao Deng, Huimin Geng, Hesham H. Ali
BMCBI
2008
126views more  BMCBI 2008»
15 years 7 months ago
ISOL@: an Italian SOLAnaceae genomics resource
Background: Present-day `-omics' technologies produce overwhelming amounts of data which include genome sequences, information on gene expression (transcripts and proteins) a...
Maria Luisa Chiusano, Nunzio D'Agostino, Alessandr...
SIAMSC
2008
148views more  SIAMSC 2008»
15 years 7 months ago
Multilevel Adaptive Aggregation for Markov Chains, with Application to Web Ranking
A multilevel adaptive aggregation method for calculating the stationary probability vector of an irreducible stochastic matrix is described. The method is a special case of the ada...
Hans De Sterck, Thomas A. Manteuffel, Stephen F. M...
SIAMSC
2011
142views more  SIAMSC 2011»
15 years 2 months ago
Efficiency Based Adaptive Local Refinement for First-Order System Least-Squares Formulations
Abstract. In this paper, we propose new adaptive local refinement (ALR) strategies for firstorder system least-squares (FOSLS) finite element in conjunction with algebraic multi...
J. H. Adler, Thomas A. Manteuffel, Stephen F. McCo...