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ISMB
2007
15 years 9 months ago
Automatic genome-wide reconstruction of phylogenetic gene trees
Gene duplication and divergence is a major evolutionary force. Despite the growing number of fully sequenced genomes, methods for investigating these events on a genome-wide scale...
Ilan Wapinski, Avi Pfeffer, Nir Friedman, Aviv Reg...
ISMB
2000
15 years 8 months ago
Intelligent Aids for Parallel Experiment Planning and Macromolecular Crystallization
This paper presents a framework called Parallel Experiment Planning (PEP) that is based on an abstraction of how experiments are performed in the domain of macromolecular crystall...
Vanathi Gopalakrishnan, Bruce G. Buchanan, John M....
ISMB
1994
15 years 8 months ago
Kinematic Manipulation of Molecular Chains Subject to Rigid Constraint
Wepresent algorithms for kinematic manipulation of molecular chains subject to fixed bond lengths and bond angles. They are useful for calculating conformations of a molecule subj...
Dinesh Manocha, Yunshan Zhu
ISMB
1993
15 years 8 months ago
Protein Sequencing Experiment Planning Using Analogy
Experiment design and execution is a central activity in the natural sciences. The SeqERsystem provides a general architecture for the integration of automated planning techniques...
Brian P. Kettler, Lindley Darden
WS
2010
ACM
15 years 5 months ago
Structured literature image finder: Parsing text and figures in biomedical literature
The SLIF project combines text-mining and image processing to extract structured information from biomedical literature. SLIF extracts images and their captions from published pap...
Amr Ahmed, Andrew Arnold, Luís Pedro Coelho...