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» Conservativity in Structured Ontologies
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BMCBI
2005
75views more  BMCBI 2005»
15 years 6 months ago
Prediction of a common structural scaffold for proteasome lid, COP9-signalosome and eIF3 complexes
Background: The 'lid' subcomplex of the 26S proteasome and the COP9 signalosome (CSN complex) share a common architecture consisting of six subunits harbouring a so-call...
Hartmut Scheel, Kay Hofmann
BMCBI
2004
174views more  BMCBI 2004»
15 years 6 months ago
Implications for domain fusion protein-protein interactions based on structural information
Background: Several in silico methods exist that were developed to predict protein interactions from the copious amount of genomic and proteomic data. One of these methods is Doma...
Jer-Ming Chia, Prasanna R. Kolatkar
ATAL
2009
Springer
16 years 1 months ago
Distributed constraint optimization with structured resource constraints
Distributed constraint optimization (DCOP) provides a framework for coordinated decision making by a team of agents. Often, during the decision making, capacity constraints on age...
Akshat Kumar, Boi Faltings, Adrian Petcu
BIBE
2007
IEEE
114views Bioinformatics» more  BIBE 2007»
16 years 1 months ago
A Hierarchical Grow-and-Match Algorithm for Backbone Resonance Assignments Given 3D Structure
Abstract—This paper develops an algorithm for NMR backbone resonance assignment given a 3D structure and a set of relatively sparse 15 N-edited NMR data, with the through-space 1...
Fei Xiong, Chris Bailey-Kellogg
BMCBI
2007
148views more  BMCBI 2007»
15 years 6 months ago
Blast sampling for structural and functional analyses
Background: The post-genomic era is characterised by a torrent of biological information flooding the public databases. As a direct consequence, similarity searches starting with ...
Anne Friedrich, Raymond Ripp, Nicolas Garnier, Emm...