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BMCBI
2008
144views more  BMCBI 2008»
15 years 7 months ago
Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A viruses
Background: The explosive growth of biological data provides opportunities for new statistical and comparative analyses of large information sets, such as alignments comprising te...
Olivo Miotto, Tin Wee Tan, Vladimir Brusic
BMCBI
2008
85views more  BMCBI 2008»
15 years 7 months ago
Wanted: unique names for unique atom positions. PDB-wide analysis of diastereotopic atom names of small molecules containing dip
Background: Biological chemistry is very stereospecific. Nonetheless, the diastereotopic oxygen atoms of diphosphate-containing molecules in the Protein Data Bank (PDB) are often ...
Christopher A. Bottoms, Dong Xu
BMCBI
2008
79views more  BMCBI 2008»
15 years 7 months ago
In silico docking of urokinase plasminogen activator and integrins
Background: Urokinase, its receptor and the integrins are functionally associated and involved in regulation of cell signaling, migration, adhesion and proliferation. No structura...
Bernard Degryse, Juan Fernández-Recio, Vale...
245
Voted
BMCBI
2008
149views more  BMCBI 2008»
15 years 7 months ago
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
Background: Automated extraction of protein-protein interactions (PPI) is an important and widely studied task in biomedical text mining. We propose a graph kernel based approach ...
Antti Airola, Sampo Pyysalo, Jari Björne, Tap...
CACM
2008
101views more  CACM 2008»
15 years 7 months ago
Just say 'A Class Defines a Data Type'
data type and (Java) class, asking about the relationship between them. The same students would also be unlikely to find an answer in a CS1 textbook. Some textbooks might not even ...
Chenglie Hu
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