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IPPS
2007
IEEE
16 years 1 months ago
A Portable Framework for High-Speed Parallel Producer/Consumers on Real CMP, SMT and SMP Architectures
This paper explores generating efficient, portable HighSpeed Producer Consumer (HSPC) code on current shared memory architectures: Chip Multi-Processors (CMP), Simultaneous Multi...
Richard T. Saunders, Clinton L. Jeffery, Derek T. ...
HPCC
2007
Springer
16 years 1 months ago
On Pancyclicity Properties of OTIS Networks
The OTIS-Network (also referred to as two-level swapped network) is composed of n clones of an n-node original network constituting its clusters. It has received much attention due...
Mohammad R. Hoseinyfarahabady, Hamid Sarbazi-Azad
IPPS
2006
IEEE
16 years 1 months ago
Multiple sequence alignment by quantum genetic algorithm
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
L. Abdesslem, M. Soham, B. Mohamed
SPAA
1990
ACM
15 years 11 months ago
Parallel Algorithms for Arrangements
We give the first efficient parallel algorithms for solving the arrangement problem. We give a deterministic algorithm for the CREW PRAM which runs in nearly optimal bounds of O(lo...
Richard J. Anderson, Paul Beame, Erik Brisson
ISMB
2000
15 years 8 months ago
Towards a Systematics for Protein Subcellular Location: Quantitative Description of Protein Localization Patterns and Automated
Determination of the functions of all expressed proteins represents one of the major upcoming challenges in computational molecular biology. Since subcellular location plays a cru...
Robert F. Murphy, Michael V. Boland, Meel Velliste