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BMCBI
2010
149views more  BMCBI 2010»
15 years 6 months ago
RuleMonkey: software for stochastic simulation of rule-based models
Background: The system-level dynamics of many molecular interactions, particularly protein-protein interactions, can be conveniently represented using reaction rules, which can be...
Joshua Colvin, Michael I. Monine, Ryan N. Gutenkun...
INFOCOM
2008
IEEE
16 years 1 months ago
Proxy Caching in Split TCP: Dynamics, Stability and Tail Asymptotics
Abstract—The split of a multihop, point to point TCP connection consists in replacing a plain, end-to-end TCP connection by a cascade of TCP connections. In such a cascade, conne...
François Baccelli, Giovanna Carofiglio, Ser...
PLDI
2012
ACM
13 years 9 months ago
Scalable and precise dynamic datarace detection for structured parallelism
Existing dynamic race detectors suffer from at least one of the following three limitations: (i) space overhead per memory location grows linearly with the number of parallel thre...
Raghavan Raman, Jisheng Zhao, Vivek Sarkar, Martin...
CORR
2011
Springer
221views Education» more  CORR 2011»
15 years 1 months ago
Course on System Design (structural approach)
—The article describes a course on system design (structural approach) which involves the following: issues of systems engineering; structural models; basic technological problem...
Mark Sh. Levin
BMCBI
2005
147views more  BMCBI 2005»
15 years 6 months ago
GATA: a graphic alignment tool for comparative sequence analysis
Background: Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved se...
David A. Nix, Michael B. Eisen