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BIBM
2007
IEEE
104views Bioinformatics» more  BIBM 2007»
15 years 11 months ago
A Protocol to Detect Local Affinities Involved in Proteins Distant Interactions
The tridimensional structure of a protein is constrained or stabilized by some local interactions between distant residues of the protein, such as disulfide bonds, electrostatic i...
Christophe Nicolas Magnan, Cécile Capponi, ...
EMO
2006
Springer
124views Optimization» more  EMO 2006»
15 years 11 months ago
I-MODE: An Interactive Multi-objective Optimization and Decision-Making Using Evolutionary Methods
With the popularity of efficient multi-objective evolutionary optimization (EMO) techniques and the need for such problem-solving activities in practice, EMO methodologies and EMO ...
Kalyanmoy Deb, Shamik Chaudhuri
KBSE
1995
IEEE
15 years 11 months ago
A Transformation System for Interactive Reformulation of Design Optimization Strategies
Numerical design optimization algorithms are highly sensitive to the particular formulation of the optimization problems they are given. The formulation of the search space, the o...
Thomas Ellman, John Keane, Takahiro Murata, Mark S...
BMCBI
2008
124views more  BMCBI 2008»
15 years 7 months ago
Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
Background: Non-homology based methods such as phylogenetic profiles are effective for predicting functional relationships between proteins with no considerable sequence or struct...
Ryosuke Watanabe, Enrique Morett, Edgar E. Vallejo
BMCBI
2006
128views more  BMCBI 2006»
15 years 7 months ago
An interactive tool for visualization of relationships between gene expression profiles
Background: Application of phenetic methods to gene expression analysis proved to be a successful approach. Visualizing the results in a 3-dimentional space may further enhance th...
Peter Ruzanov, Steven J. M. Jones