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BMCBI
2008
132views more  BMCBI 2008»
15 years 7 months ago
The Average Mutual Information Profile as a Genomic Signature
Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
Mark Bauer, Sheldon M. Schuster, Khalid Sayood
BMCBI
2006
123views more  BMCBI 2006»
15 years 7 months ago
An Automated Method for Rapid Identification of Putative Gene Family Members in Plants
Background: Gene duplication events have played a significant role in genome evolution, particularly in plants. Exhaustive searches for all members of a known gene family as well ...
Ronald L. Frank, Ajay Mane, Fikret Erçal
SIAMSC
2008
131views more  SIAMSC 2008»
15 years 7 months ago
Fast Monte Carlo Simulation Methods for Biological Reaction-Diffusion Systems in Solution and on Surfaces
Many important physiological processes operate at time and space scales far beyond those accessible to atom-realistic simulations, and yet discrete stochastic rather than continuum...
Rex A. Kerr, Thomas M. Bartol, Boris Kaminsky, Mar...
SIMPRA
2008
106views more  SIMPRA 2008»
15 years 7 months ago
CEST and MEST: Tools for the simulation of radio frequency electric discharges in waveguides
In this paper we present two software tools for the simulation of electron multiplication processes in radio frequency (RF) waveguides. The electric discharges are caused by the m...
Francisco Pérez, Juan de Lara, Luis Conde, ...
BMCBI
2004
94views more  BMCBI 2004»
15 years 7 months ago
GASP: Gapped Ancestral Sequence Prediction for proteins
Background: The prediction of ancestral protein sequences from multiple sequence alignments is useful for many bioinformatics analyses. Predicting ancestral sequences is not a sim...
Richard J. Edwards, Denis C. Shields
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