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CSR
2006
Springer
15 years 10 months ago
Fast Motif Search in Protein Sequence Databases
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Elena Zheleva, Abdullah N. Arslan
BMCBI
2007
152views more  BMCBI 2007»
15 years 7 months ago
Bioinformatic identification of novel putative photoreceptor specific cis-elements
Background: Cell specific gene expression is largely regulated by different combinations of transcription factors that bind cis-elements in the upstream promoter sequence. However...
Charles G. Danko, Vera A. McIlvain, Maochun Qin, B...
BMCBI
2007
133views more  BMCBI 2007»
15 years 6 months ago
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
Background: Gene expression measurements during the development of the fly Drosophila melanogaster are routinely used to find functional modules of temporally co-expressed genes. ...
Ivan G. Costa, Roland Krause, Lennart Opitz, Alexa...
DAC
2008
ACM
16 years 7 months ago
Automated hardware-independent scenario identification
Scenario-based design exploits the time-varying execution behavior of applications by dynamically adapting the system on which they run. This is a particularly interesting design ...
Juan Hamers, Lieven Eeckhout
WWW
2008
ACM
16 years 7 months ago
Knowledge sharing and yahoo answers: everyone knows something
Yahoo Answers (YA) is a large and diverse question-answer forum, acting not only as a medium for sharing technical knowledge, but as a place where one can seek advice, gather opin...
Lada A. Adamic, Jun Zhang, Eytan Bakshy, Mark S. A...