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BMCBI
2004
150views more  BMCBI 2004»
15 years 6 months ago
Graph-based iterative Group Analysis enhances microarray interpretation
Background: One of the most time-consuming tasks after performing a gene expression experiment is the biological interpretation of the results by identifying physiologically impor...
Rainer Breitling, Anna Amtmann, Pawel Herzyk
FSTTCS
2004
Springer
16 years 8 days ago
Genome Halving Problem Revisited
The Genome Halving Problem is motivated by the whole genome duplication events in molecular evolution that double the gene content of a genome and result in a perfect duplicated ge...
Max A. Alekseyev, Pavel A. Pevzner
WOB
2004
134views Bioinformatics» more  WOB 2004»
15 years 8 months ago
Reconstruction of Phylogenetic Trees using the Ant Colony Optimization Paradigm
We developed a new approach for the reconstruction of phylogenetic trees using ant colony optimization metaheuristics.Atree is constructed using a fully connected graph and the pro...
Heitor S. Lopes, Mauricio Perretto
PRIB
2010
Springer
192views Bioinformatics» more  PRIB 2010»
15 years 5 months ago
Structured Output Prediction of Anti-cancer Drug Activity
We present a structured output prediction approach for classifying potential anti-cancer drugs. Our QSAR model takes as input a description of a molecule and predicts the activity...
Hongyu Su, Markus Heinonen, Juho Rousu
SDM
2009
SIAM
138views Data Mining» more  SDM 2009»
16 years 4 months ago
ShatterPlots: Fast Tools for Mining Large Graphs.
Graphs appear in several settings, like social networks, recommendation systems, computer communication networks, gene/protein biological networks, among others. A deep, recurring...
Ana Paula Appel, Andrew Tomkins, Christos Faloutso...