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BMCBI
2008
173views more  BMCBI 2008»
15 years 7 months ago
Improved machine learning method for analysis of gas phase chemistry of peptides
Background: Accurate peptide identification is important to high-throughput proteomics analyses that use mass spectrometry. Search programs compare fragmentation spectra (MS/MS) o...
Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Nat...
BMCBI
2008
162views more  BMCBI 2008»
15 years 7 months ago
Background correction using dinucleotide affinities improves the performance of GCRMA
Background: High-density short oligonucleotide microarrays are a primary research tool for assessing global gene expression. Background noise on microarrays comprises a significan...
Raad Z. Gharaibeh, Anthony Fodor, Cynthia Gibas
210
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BMCBI
2006
117views more  BMCBI 2006»
15 years 7 months ago
Incorporating background frequency improves entropy-based residue conservation measures
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
Kai Wang, Ram Samudrala
IJON
2006
109views more  IJON 2006»
15 years 7 months ago
Integrating the improved CBP model with kernel SOM
In this paper, we first design a more generalized network model, Improved CBP, based on the same structure as Circular BackPropagation (CBP) proposed by Ridella et al. The novelty ...
Qun Dai, Songcan Chen
SIGMOD
1997
ACM
160views Database» more  SIGMOD 1997»
15 years 11 months ago
Improved Query Performance with Variant Indexes
: The read-mostly environment of data warehousing makes it possible to use more complex indexes to speed up queries than in situations where concurrent updatesare present. The curr...
Patrick E. O'Neil, Dallan Quass