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POPL
2005
ACM
16 years 8 months ago
Parametric polymorphism for XML
Despite the extensiveness of recent investigations on static typing for XML, parametric polymorphism has rarely been treated. This well-established typing discipline can also be u...
Haruo Hosoya, Alain Frisch, Giuseppe Castagna
RECOMB
2007
Springer
16 years 8 months ago
Minimizing and Learning Energy Functions for Side-Chain Prediction
Abstract. Side-chain prediction is an important subproblem of the general protein folding problem. Despite much progress in side-chain prediction, performance is far from satisfact...
Chen Yanover, Ora Schueler-Furman, Yair Weiss
RECOMB
2006
Springer
16 years 8 months ago
New Methods for Detecting Lineage-Specific Selection
Abstract. So far, most methods for identifying sequences under selection based on comparative sequence data have either assumed selectional pressures are the same across all branch...
Adam C. Siepel, Katherine S. Pollard, David Haussl...
RECOMB
2005
Springer
16 years 8 months ago
Constructing a Smallest Refining Galled Phylogenetic Network
Reticulation events occur frequently in many types of species. Therefore, to develop accurate methods for reconstructing phylogenetic networks in order to describe evolutionary his...
Trinh N. D. Huynh, Jesper Jansson, Nguyen Bao Nguy...
STOC
2007
ACM
137views Algorithms» more  STOC 2007»
16 years 8 months ago
Testing k-wise and almost k-wise independence
In this work, we consider the problems of testing whether a distribution over {0, 1}n is k-wise (resp. ( , k)-wise) independent using samples drawn from that distribution. For the...
Noga Alon, Alexandr Andoni, Tali Kaufman, Kevin Ma...
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