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» Linking Data to Ontologies
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233
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BMCBI
2007
166views more  BMCBI 2007»
15 years 7 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
218
Voted
BMCBI
2005
159views more  BMCBI 2005»
15 years 7 months ago
Columba: an integrated database of proteins, structures, and annotations
Background: Structural and functional research often requires the computation of sets of protein structures based on certain properties of the proteins, such as sequence features,...
Silke Trißl, Kristian Rother, Heiko Mül...
APWEB
2007
Springer
15 years 11 months ago
DBMSs with Native XML Support: Towards Faster, Richer, and Smarter Data Management
Abstract. XML provides a natural mechanism for representing semistructured and unstructured data. It becomes the basis for encoding a large variety of information, for example, the...
Min Wang
BMCBI
2008
95views more  BMCBI 2008»
15 years 7 months ago
Unsupervised reduction of random noise in complex data by a row-specific, sorted principal component-guided method
Background: Large biological data sets, such as expression profiles, benefit from reduction of random noise. Principal component (PC) analysis has been used for this purpose, but ...
Joseph W. Foley, Fumiaki Katagiri
241
Voted
WWW
2008
ACM
16 years 8 months ago
Networked graphs: a declarative mechanism for SPARQL rules, SPARQL views and RDF data integration on the web
Easy reuse and integration of declaratively described information in a distributed setting is one of the main motivations for building the Semantic Web. Despite of this claim, reu...
Simon Schenk, Steffen Staab