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BMCBI
2010
205views more  BMCBI 2010»
15 years 7 months ago
A fast indexing approach for protein structure comparison
Background: Protein structure comparison is a fundamental task in structural biology. While the number of known protein structures has grown rapidly over the last decade, searchin...
Lei Zhang, James Bailey, Arun Siddharth Konagurthu...
BMCBI
2007
137views more  BMCBI 2007»
15 years 7 months ago
PlnTFDB: an integrative plant transcription factor database
Background: Transcription factors (TFs) are key regulatory proteins that enhance or repress the transcriptional rate of their target genes by binding to specific promoter regions ...
Diego Mauricio Riaño-Pachón, Sloboda...
ICDE
2011
IEEE
281views Database» more  ICDE 2011»
14 years 11 months ago
Declarative analysis of noisy information networks
—There is a growing interest in methods for analyzing data describing networks of all types, including information, biological, physical, and social networks. Typically the data ...
Walaa Eldin Moustafa, Galileo Namata, Amol Deshpan...
SIGCOMM
2006
ACM
16 years 1 months ago
Systematic topology analysis and generation using degree correlations
Researchers have proposed a variety of metrics to measure important graph properties, for instance, in social, biological, and computer networks. Values for a particular graph met...
Priya Mahadevan, Dmitri V. Krioukov, Kevin R. Fall...
FAST
2008
15 years 9 months ago
Improving I/O Performance of Applications through Compiler-Directed Code Restructuring
Ever-increasing complexity of large-scale applications and continuous increases in sizes of the data they process make the problem of maximizing performance of such applications a...
Mahmut T. Kandemir, Seung Woo Son, Mustafa Karak&o...