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» On the Design of Codes for DNA Computing
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PPPJ
2009
ACM
15 years 11 months ago
SlimVM: a small footprint Java virtual machine for connected embedded systems
The usage of cellular phones, PDAs, and other mobile devices has increased dramatically over the past ten years. Java is targeted to be one of the most popular execution environme...
Christoph Kerschbaumer, Gregor Wagner, Christian W...
RECOMB
2001
Springer
16 years 7 months ago
Finding motifs using random projections
motif discovery problem abstracts the task of discovering short, conserved sites in genomic DNA. Pevzner and Sze recently described a precise combinatorial formulation of motif di...
Jeremy Buhler, Martin Tompa
BMCBI
2006
100views more  BMCBI 2006»
15 years 7 months ago
Towards a better solution to the shortest common supersequence problem: the deposition and reduction algorithm
Background: The problem of finding a Shortest Common Supersequence (SCS) of a set of sequences is an important problem with applications in many areas. It is a key problem in biol...
Kang Ning, Hon Wai Leong
BMCBI
2006
136views more  BMCBI 2006»
15 years 7 months ago
Java GUI for InterProScan (JIPS): A tool to help process multiple InterProScans and perform ortholog analysis
Background: Recent, rapid growth in the quantity of available genomic data has generated many protein sequences that are not yet biochemically classified. Thus, the prediction of ...
Aijazuddin Syed, Chris Upton
BMCBI
2008
214views more  BMCBI 2008»
15 years 5 months ago
Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations
Background: During the most recent decade many Bayesian statistical models and software for answering questions related to the genetic structure underlying population samples have...
Jukka Corander, Pekka Marttinen, Jukka Siré...