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BMCBI
2004
124views more  BMCBI 2004»
15 years 7 months ago
Tests for finding complex patterns of differential expression in cancers: towards individualized medicine
Background: Microarray studies in cancer compare expression levels between two or more sample groups on thousands of genes. Data analysis follows a population-level approach (e.g....
James Lyons-Weiler, Satish Patel, Michael J. Becic...
SIAMJO
2002
133views more  SIAMJO 2002»
15 years 7 months ago
SNOPT: An SQP Algorithm for Large-Scale Constrained Optimization
Abstract. Sequential quadratic programming (SQP) methods have proved highly effective for solving constrained optimization problems with smooth nonlinear functions in the objective...
Philip E. Gill, Walter Murray, Michael A. Saunders
PE
2010
Springer
114views Optimization» more  PE 2010»
15 years 6 months ago
Analysis of scheduling policies under correlated job sizes
Correlations in traffic patterns are an important facet of the workloads faced by real systems, and one that has far-reaching consequences on the performance and optimization of t...
Varun Gupta, Michelle Burroughs, Mor Harchol-Balte...
BMCBI
2010
108views more  BMCBI 2010»
15 years 2 months ago
Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset
Background: Concomitant with the rise in the popularity of DNA microarrays has been a surge of proposed methods for the analysis of microarray data. Fully controlled "spike-i...
Qianqian Zhu, Jeffrey C. Miecznikowski, Marc S. Ha...
SIAMCOMP
2011
15 years 2 months ago
The Chow Parameters Problem
Abstract. In the 2nd Annual FOCS (1961), Chao-Kong Chow proved that every Boolean threshold function is uniquely determined by its degree-0 and degree-1 Fourier coefficients. These...
Ryan O'Donnell, Rocco A. Servedio