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» Performance Analysis Framework for Layout Analysis Methods
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PPDP
2010
Springer
15 years 5 months ago
Precise complexity analysis for efficient datalog queries
Given a set of Datalog rules, facts, and a query, answers to the query can be inferred bottom-up starting with the facts or top-down starting with the query. For efficiently answe...
K. Tuncay Tekle, Yanhong A. Liu
BMCBI
2011
14 years 11 months ago
Gene set analysis for longitudinal gene expression data
Background: Gene set analysis (GSA) has become a successful tool to interpret gene expression profiles in terms of biological functions, molecular pathways, or genomic locations. ...
Ke Zhang, Haiyan Wang, Arne C. Bathke, Solomon W. ...
185
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BMCBI
2008
103views more  BMCBI 2008»
15 years 7 months ago
Parameter estimation for robust HMM analysis of ChIP-chip data
Background: Tiling arrays are an important tool for the study of transcriptional activity, proteinDNA interactions and chromatin structure on a genome-wide scale at high resolutio...
Peter Humburg, David Bulger, Glenn Stone
CSDA
2008
128views more  CSDA 2008»
15 years 7 months ago
Classification tree analysis using TARGET
Tree models are valuable tools for predictive modeling and data mining. Traditional tree-growing methodologies such as CART are known to suffer from problems including greediness,...
J. Brian Gray, Guangzhe Fan
PASTE
2010
ACM
16 years 19 days ago
Opportunities for concurrent dynamic analysis with explicit inter-core communication
Multicore is now the dominant processor trend, and the number of cores is rapidly increasing. The paradigm shift to multicore forces the redesign of the software stack, which incl...
Jungwoo Ha, Stephen P. Crago