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CORR
2000
Springer
110views Education» more  CORR 2000»
15 years 6 months ago
Efficient probabilistic top-down and left-corner parsing
This paper examines efficient predictive broadcoverage parsing without dynamic programming. In contrast to bottom-up methods, depth-first top-down parsing produces partial parses ...
Brian Roark, Mark Johnson
BMCBI
2010
152views more  BMCBI 2010»
15 years 7 months ago
FITBAR: a web tool for the robust prediction of prokaryotic regulons
Background: The binding of regulatory proteins to their specific DNA targets determines the accurate expression of the neighboring genes. The in silico prediction of new binding s...
Jacques Oberto
BMCBI
2005
121views more  BMCBI 2005»
15 years 6 months ago
Automated methods of predicting the function of biological sequences using GO and BLAST
Background: With the exponential increase in genomic sequence data there is a need to develop automated approaches to deducing the biological functions of novel sequences with hig...
Craig E. Jones, Ute Baumann, Alfred L. Brown
BMCBI
2004
144views more  BMCBI 2004»
15 years 6 months ago
GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes
Background: The function of a novel gene product is typically predicted by transitive assignment of annotation from similar sequences. We describe a novel method, GOtcha, for pred...
David M. A. Martin, Matthew Berriman, Geoffrey J. ...
HPDC
2009
IEEE
16 years 1 months ago
Trace-based evaluation of job runtime and queue wait time predictions in grids
Large-scale distributed computing systems such as grids are serving a growing number of scientists. These environments bring about not only the advantages of an economy of scale, ...
Omer Ozan Sonmez, Nezih Yigitbasi, Alexandru Iosup...