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» Programming by Numbers: A Programming Method for Novices
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BMCBI
2007
102views more  BMCBI 2007»
15 years 6 months ago
Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
Background: The number of algorithms available to predict ligand-protein interactions is large and ever-increasing. The number of test cases used to validate these methods is usua...
Luis A. Diago, Persy Morell, Longendri Aguilera, E...
209
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TKDE
2012
253views Formal Methods» more  TKDE 2012»
13 years 9 months ago
Horizontal Aggregations in SQL to Prepare Data Sets for Data Mining Analysis
—Preparing a data set for analysis is generally the most time consuming task in a data mining project, requiring many complex SQL queries, joining tables and aggregating columns....
Carlos Ordonez, Zhibo Chen 0002
BMCBI
2005
125views more  BMCBI 2005»
15 years 6 months ago
DIALIGN-T: An improved algorithm for segment-based multiple sequence alignment
Background: We present a complete re-implementation of the segment-based approach to multiple protein alignment that contains a number of improvements compared to the previous ver...
Amarendran R. Subramanian, Jan Weyer-Menkhoff, Mic...

Lecture Notes
443views
17 years 4 months ago
Design and Analysis of Computer Algorithms
"This course will consist of a number of major sections. The first will be a short review of some preliminary material, including asymptotics, summations, and recurrences and ...
David M. Mount
FOCS
2005
IEEE
16 years 10 days ago
Sampling-based Approximation Algorithms for Multi-stage Stochastic
Stochastic optimization problems provide a means to model uncertainty in the input data where the uncertainty is modeled by a probability distribution over the possible realizatio...
Chaitanya Swamy, David B. Shmoys