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ICAPR
2009
Springer
16 years 1 months ago
Hierarchical Local Maps for Robust Approximate Nearest Neighbor Computation
In this paper, we propose a novel method for fast nearest neighbors retrieval in non-Euclidean and non-metric spaces. We organize the data into a hierarchical fashion that preserv...
Pratyush Bhatt, Anoop M. Namboodiri
PKDD
2005
Springer
131views Data Mining» more  PKDD 2005»
16 years 10 days ago
ISOLLE: Locally Linear Embedding with Geodesic Distance
Locally Linear Embedding (LLE) has recently been proposed as a method for dimensional reduction of high-dimensional nonlinear data sets. In LLE each data point is reconstructed fro...
Claudio Varini, Andreas Degenhard, Tim W. Nattkemp...
BMCBI
2008
149views more  BMCBI 2008»
15 years 7 months ago
Evolution of biological sequences implies an extreme value distribution of type I for both global and local pairwise alignment s
Background: Confidence in pairwise alignments of biological sequences, obtained by various methods such as Blast or Smith-Waterman, is critical for automatic analyses of genomic d...
Olivier Bastien, Eric Maréchal
BMCBI
2011
14 years 10 months ago
In-silico prediction of disorder content using hybrid sequence representation
Background: Intrinsically disordered proteins play important roles in various cellular activities and their prevalence was implicated in a number of human diseases. The knowledge ...
Marcin J. Mizianty, Tuo Zhang, Bin Xue, Yaoqi Zhou...
BMCBI
2010
127views more  BMCBI 2010»
15 years 7 months ago
PeptideMine - A webserver for the design of peptides for protein-peptide binding studies derived from protein-protein interactom
Background: Signal transduction events often involve transient, yet specific, interactions between structurally conserved protein domains and polypeptide sequences in target prote...
Khader Shameer, Lalima L. Madan, Shivamurthy Veera...