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BMCBI
2005
140views more  BMCBI 2005»
15 years 7 months ago
JACOP: A simple and robust method for the automated classification of protein sequences with modular architecture
Background: Whole-genome sequencing projects are rapidly producing an enormous number of new sequences. Consequently almost every family of proteins now contains hundreds of membe...
Peter Sperisen, Marco Pagni
NAR
2002
111views more  NAR 2002»
15 years 6 months ago
DNA Data Bank of Japan (DDBJ) for genome scale research in life science
The DNA Data Bank of Japan (DDBJ, http:// www.ddbj.nig.ac.jp) has made an effort to collect as much data as possible mainly from Japanese researchers. The increase rates of the da...
Yoshio Tateno, Tadashi Imanishi, Satoru Miyazaki, ...
NAR
2007
65views more  NAR 2007»
15 years 6 months ago
STRING 7 - recent developments in the integration and prediction of protein interactions
Information on protein–protein interactions is still mostly limited to a small number of model organisms, and originates from a wide variety of experimental and computational te...
Christian von Mering, Lars Juhl Jensen, Michael Ku...
PVLDB
2008
146views more  PVLDB 2008»
15 years 6 months ago
Resisting structural re-identification in anonymized social networks
We identify privacy risks associated with releasing network data sets and provide an algorithm that mitigates those risks. A network consists of entities connected by links repres...
Michael Hay, Gerome Miklau, David Jensen, Donald F...
WCRE
2010
IEEE
15 years 5 months ago
Blending Conceptual and Evolutionary Couplings to Support Change Impact Analysis in Source Code
— The paper presents an approach that combines conceptual and evolutionary techniques to support change impact analysis in source code. Information Retrieval (IR) is used to deri...
Huzefa H. Kagdi, Malcom Gethers, Denys Poshyvanyk,...