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ENTCS
2006
115views more  ENTCS 2006»
15 years 7 months ago
Analyzing the Uses of a Software Modeling Tool
While a lot of progress has been made in improving analyses and tools that aid software development, less effort has been spent on studying how such tools are commonly used in pra...
Xiaoming Li, Daryl Shannon, Jabari Walker, Sarfraz...
BMCBI
2007
145views more  BMCBI 2007»
15 years 7 months ago
Improved benchmarks for computational motif discovery
Background: An important step in annotation of sequenced genomes is the identification of transcription factor binding sites. More than a hundred different computational methods h...
Geir Kjetil Sandve, Osman Abul, Vegard Walseng, Fi...
BMCBI
2007
200views more  BMCBI 2007»
15 years 7 months ago
BNDB - The Biochemical Network Database
Background: Technological advances in high-throughput techniques and efficient data acquisition methods have resulted in a massive amount of life science data. The data is stored ...
Jan Küntzer, Christina Backes, Torsten Blum, ...
BMCBI
2007
166views more  BMCBI 2007»
15 years 7 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
BMCBI
2007
128views more  BMCBI 2007»
15 years 7 months ago
Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements
Background: Arabidopsis thaliana is the model species of current plant genomic research with a genome size of 125 Mb and approximately 28,000 genes. The function of half of these ...
Hui Lan, Rachel Carson, Nicholas J. Provart, Antho...
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