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» Scales and Scale-like Structures
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DSN
2009
IEEE
16 years 1 months ago
On the effectiveness of structural detection and defense against P2P-based botnets
Recently, peer-to-peer (P2P) networks have emerged as a covert communication platform for malicious programs known as bots. As popular distributed systems, they allow bots to comm...
Duc T. Ha, Guanhua Yan, Stephan Eidenbenz, Hung Q....
SAC
2006
ACM
16 years 25 days ago
Mining and analyzing the topological structure of protein-protein interaction networks
We report a comprehensive evaluation of the topological structure of protein-protein interaction (PPI) networks by mining and analyzing graphs constructed from the publicly availa...
Daniel Duanqing Wu, Xiaohua Hu
BMCBI
2010
175views more  BMCBI 2010»
15 years 7 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
BMCBI
2008
123views more  BMCBI 2008»
15 years 7 months ago
PocketMatch: A new algorithm to compare binding sites in protein structures
Background: Recognizing similarities and deriving relationships among protein molecules is a fundamental requirement in present-day biology. Similarities can be present at various...
Kalidas Yeturu, Nagasuma Chandra
BMCBI
2006
101views more  BMCBI 2006»
15 years 7 months ago
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms
Background: The development of algorithms to infer the structure of gene regulatory networks based on expression data is an important subject in bioinformatics research. Validatio...
Tim Van den Bulcke, Koen Van Leemput, Bart Naudts,...