The 3D conformation of a protein may be compactly represented in a symmetrical, square, boolean matrix of pairwise, inter-residue contacts, or "contact map". The contact...
Jingjing Hu, Xiaolan Shen, Yu Shao, Chris Bystroff...
We introduce a new variant of the popular Burrows-Wheeler transform (BWT) called Geometric Burrows-Wheeler Transform (GBWT). Unlike BWT, which merely permutes the text, GBWT conve...
In this paper, we present a novel three-stage process to visualize the structure of point clouds in arbitrary dimensions. To get insight into the structure and complexity of a dat...
Keyword search is an effective approach for most users to search for information because they do not need to learn complex query languages or the underlying structures of the data....
This paper discusses our participation in INEX using the TIJAH XML-IR system. We have enriched the TIJAH system, which follows a standard layered database architecture, with severa...