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BMCBI
2007
104views more  BMCBI 2007»
15 years 7 months ago
Comparative evaluation of gene-set analysis methods
Background: Multiple data-analytic methods have been proposed for evaluating gene-expression levels in specific biological pathways, assessing differential expression associated w...
Qi Liu, Irina Dinu, Adeniyi J. Adewale, John D. Po...
BMCBI
2005
132views more  BMCBI 2005»
15 years 7 months ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer
INFORMATICALT
2010
122views more  INFORMATICALT 2010»
15 years 6 months ago
On a Time-Varying Parameter Adaptive Self-Organizing System in the Presence of Large Outliers in Observations
In the previous papers (Pupeikis, 2000; Genov et al., 2006; Atanasov and Pupeikis, 2009), a direct approach for estimating the parameters of a discrete-time linear time-invariant (...
Rimantas Pupeikis
ANCS
2009
ACM
15 years 5 months ago
Design and performance analysis of a DRAM-based statistics counter array architecture
The problem of maintaining efficiently a large number (say millions) of statistics counters that need to be updated at very high speeds (e.g. 40 Gb/s) has received considerable re...
Haiquan (Chuck) Zhao, Hao Wang, Bill Lin, Jun (Jim...
IWMM
2011
Springer
245views Hardware» more  IWMM 2011»
14 years 10 months ago
Waste not, want not: resource-based garbage collection in a shared environment
To achieve optimal performance, garbage-collected applications must balance the sizes of their heaps dynamically. Sizing the heap too small can reduce throughput by increasing the...
Matthew Hertz, Stephen Kane, Elizabeth Keudel, Ton...