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315
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POPL
2004
ACM
16 years 7 months ago
Free theorems in the presence of seq
Parametric polymorphism constrains the behavior of pure functional programs in a way that allows the derivation of interesting theorems about them solely from their types, i.e., v...
Janis Voigtländer, Patricia Johann
180
Voted
RECOMB
2008
Springer
16 years 7 months ago
Accurate Computation of Likelihoods in the Coalescent with Recombination Via Parsimony
Understanding the variation of recombination rates across a given genome is crucial for disease gene mapping and for detecting signatures of selection, to name just a couple of app...
Jotun Hein, Rune B. Lyngsø, Yun S. Song
212
Voted
RECOMB
2007
Springer
16 years 7 months ago
Framework for Identifying Common Aberrations in DNA Copy Number Data
High-resolution array comparative genomic hybridization (aCGH) provides exon-level mapping of DNA aberrations in cells or tissues. Such aberrations are central to carcinogenesis an...
Amir Ben-Dor, Doron Lipson, Anya Tsalenko, Mark Re...
221
Voted
RECOMB
2004
Springer
16 years 7 months ago
Computational identification of evolutionarily conserved exons
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
Adam C. Siepel, David Haussler
211
Voted
RECOMB
2004
Springer
16 years 7 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
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