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APBC
2004
108views Bioinformatics» more  APBC 2004»
15 years 9 months ago
Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
Tun-Wen Pai, Margaret Dah-Tsyr Chang, Jia-Han Chu,...
JCB
2006
115views more  JCB 2006»
15 years 7 months ago
Designing an A* Algorithm for Calculating Edit Distance between Rooted-Unordered Trees
Tree structures are useful for describing and analyzing biological objects and processes. Consequently, there is a need to design metrics and algorithms to compare trees. A natura...
Yair Horesh, Ramit Mehr, Ron Unger
258
Voted
SIGMOD
2011
ACM
193views Database» more  SIGMOD 2011»
14 years 10 months ago
Fast checkpoint recovery algorithms for frequently consistent applications
Advances in hardware have enabled many long-running applications to execute entirely in main memory. As a result, these applications have increasingly turned to database technique...
Tuan Cao, Marcos Antonio Vaz Salles, Benjamin Sowe...
DAC
2004
ACM
16 years 8 months ago
A SAT-based algorithm for reparameterization in symbolic simulation
Parametric representations used for symbolic simulation of circuits usually use BDDs. After a few steps of symbolic simulation, state set representation is converted from one para...
Pankaj Chauhan, Edmund M. Clarke, Daniel Kroening
211
Voted
SIGSOFT
2006
ACM
16 years 8 months ago
SYNERGY: a new algorithm for property checking
We consider the problem if a given program satisfies a specified safety property. Interesting programs have infinite state spaces, with inputs ranging over infinite domains, and f...
Bhargav S. Gulavani, Thomas A. Henzinger, Yamini K...