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POPL
2003
ACM
16 years 8 months ago
Pure patterns type systems
We introduce a new framework of algebraic pure type systems in which we consider rewrite rules as lambda terms with patterns and rewrite rule application as abstraction applicatio...
Gilles Barthe, Horatiu Cirstea, Claude Kirchner, L...
POPL
2003
ACM
16 years 8 months ago
Bitwidth aware global register allocation
Multimedia and network processing applications make extensive use of subword data. Since registers are capable of holding a full data word, when a subword variable is assigned a r...
Sriraman Tallam, Rajiv Gupta
RECOMB
2006
Springer
16 years 8 months ago
Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes
Abstract. Transcriptional interactions in a cell are modulated by a variety of mechanisms that prevent their representation as pure pairwise interactions between a transcription fa...
Kai Wang, Ilya Nemenman, Nilanjana Banerjee, Adam ...
RECOMB
2005
Springer
16 years 8 months ago
Segmentation Conditional Random Fields (SCRFs): A New Approach for Protein Fold Recognition
Abstract. Protein fold recognition is an important step towards understanding protein three-dimensional structures and their functions. A conditional graphical model, i.e. segmenta...
Yan Liu, Jaime G. Carbonell, Peter Weigele, Vanath...
RECOMB
2005
Springer
16 years 8 months ago
An Interaction-Dependent Model for Transcription Factor Binding
Transcriptional regulation is accomplished by several transcription factor proteins that bind to specific DNA elements in the relative vicinity of the gene, and interact with each ...
Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli
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