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BMCBI
2010
139views more  BMCBI 2010»
15 years 7 months ago
CMASA: an accurate algorithm for detecting local protein structural similarity and its application to enzyme catalytic site anno
Background: The rapid development of structural genomics has resulted in many "unknown function" proteins being deposited in Protein Data Bank (PDB), thus, the functiona...
Gong-Hua Li, Jing-Fei Huang
BIOINFORMATICS
2011
15 years 1 months ago
All-atom knowledge-based potential for RNA structure prediction and assessment
Motivation: Over the recent years, the vision that RNA simply serves as information transfer molecule has dramatically changed. The study of the sequence/structure/function relati...
Emidio Capriotti, Tomás Norambuena, Marc A....
GECCO
2005
Springer
102views Optimization» more  GECCO 2005»
16 years 23 days ago
Latent variable crossover for k-tablet structures and its application to lens design problems
This paper presents the Real-coded Genetic Algorithms for high-dimensional ill-scaled structures, what is called, the ktablet structure. The k-tablet structure is the landscape th...
Jun Sakuma, Shigenobu Kobayashi
BMCBI
2007
136views more  BMCBI 2007»
15 years 7 months ago
Comparison of protein structures by growing neighborhood alignments
Background: Design of protein structure comparison algorithm is an important research issue, having far reaching implications. In this article, we describe a protein structure com...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
IPM
2007
95views more  IPM 2007»
15 years 7 months ago
Using structural contexts to compress semistructured text collections
We describe a compression model for semistructured documents, called Structural Contexts Model (SCM), which takes advantage of the context information usually implicit in the stru...
Joaquín Adiego, Gonzalo Navarro, Pablo de l...