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DASFAA
2005
IEEE
209views Database» more  DASFAA 2005»
16 years 26 days ago
PADS: Protein Structure Alignment Using Directional Shape Signatures
A novel approach for similarity search on the protein structure databases is proposed. PADS (Protein Alignment by Directional shape Signatures) incorporates the three dimensional ...
S. Alireza Aghili, Divyakant Agrawal, Amr El Abbad...
AUTOMATICA
2007
88views more  AUTOMATICA 2007»
15 years 7 months ago
Three and higher dimensional autonomous formations: Rigidity, persistence and structural persistence
In this paper, we generalize the notion of persistence, which has been originally introduced for two-dimensional formations, to Rd for d 3, seeking to provide a theoretical framew...
Changbin Yu, Julien M. Hendrickx, Baris Fidan, Bri...
BMCBI
2010
136views more  BMCBI 2010»
15 years 7 months ago
Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfa
Background: Many newly detected point mutations are located in protein-coding regions of the human genome. Knowledge of their effects on the protein's 3D structure provides i...
Hanka Venselaar, Tim A. H. te Beek, Remko K. P. Ku...
BMCBI
2008
94views more  BMCBI 2008»
15 years 7 months ago
Structural assembly of two-domain proteins by rigid-body docking
Background: Modelling proteins with multiple domains is one of the central challenges in Structural Biology. Although homology modelling has successfully been applied for predicti...
Tammy M. K. Cheng, Tom L. Blundell, Juan Fern&aacu...
BMCBI
2006
81views more  BMCBI 2006»
15 years 7 months ago
Multipolar representation of protein structure
Background: That the structure determines the function of proteins is a central paradigm in biology. However, protein functions are more directly related to cooperative effects at...
Apostol Gramada, Philip E. Bourne