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CPM
2005
Springer
97views Combinatorics» more  CPM 2005»
16 years 1 months ago
On the Complexity of Sparse Exon Assembly
Gene structure prediction is one of the most important problems in computational molecular biology. It involves two steps: the first is finding the evidence (e.g. predicting spl...
Carmel Kent, Gad M. Landau, Michal Ziv-Ukelson
ICSE
2004
IEEE-ACM
16 years 29 days ago
Precise Modeling of Design Patterns in UML
Prior research attempts to formalize the structure of object-oriented design patterns for a more precise specification of design patterns. It also allows automation support to be ...
Jeffrey Ka-Hing Mak, Clifford Sze-Tsan Choy, Danie...
SODA
2010
ACM
144views Algorithms» more  SODA 2010»
15 years 6 months ago
Cell-Probe Lower Bounds for Succinct Partial Sums
The partial sums problem in succinct data structures asks to preprocess an array A[1 . . n] of bits into a data structure using as close to n bits as possible, and answer queries ...
Mihai Patrascu, Emanuele Viola
RECOMB
2009
Springer
16 years 8 months ago
Simultaneous Alignment and Folding of Protein Sequences
Abstract. Accurate comparative analysis tools for low-homology proteins remains a difficult challenge in computational biology, especially sequence alignment and consensus folding ...
Bonnie Berger, Charles W. O'Donnell, Jér&oc...
ATS
2005
IEEE
100views Hardware» more  ATS 2005»
16 years 1 months ago
A Methodology to Compute Bounds on Crosstalk Effects in Arbitrary Interconnects
In this paper, we present a methodology that uses the moments of a generic crosstalk pulse signal to derive upper bounds on the amplitude of crosstalk pulse in arbitrary interconn...
Wichian Sirisaengtaksin, Sandeep K. Gupta