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BMCBI
2008
118views more  BMCBI 2008»
15 years 7 months ago
Inferring transcriptional compensation interactions in yeast via stepwise structure equation modeling
Background: With the abundant information produced by microarray technology, various approaches have been proposed to infer transcriptional regulatory networks. However, few appro...
Grace S. Shieh, Chung-Ming Chen, Ching-Yun Yu, Jui...
BMCBI
2004
126views more  BMCBI 2004»
15 years 7 months ago
A probabilistic model for the evolution of RNA structure
Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
Ian Holmes
DEBU
2010
138views more  DEBU 2010»
15 years 5 months ago
A Rule-Based Citation System for Structured and Evolving Datasets
We consider the requirements that a citation system must fulfill in order to cite structured and evolving data sets. Such a system must take into account variable granularity, con...
Peter Buneman, Gianmaria Silvello
BMCBI
2010
102views more  BMCBI 2010»
15 years 2 months ago
Predicting protein-protein interactions in unbalanced data using the primary structure of proteins
Background: Elucidating protein-protein interactions (PPIs) is essential to constructing protein interaction networks and facilitating our understanding of the general principles ...
Chi-Yuan Yu, Lih-Ching Chou, Darby Tien-Hao Chang
PLDI
2012
ACM
13 years 10 months ago
Scalable and precise dynamic datarace detection for structured parallelism
Existing dynamic race detectors suffer from at least one of the following three limitations: (i) space overhead per memory location grows linearly with the number of parallel thre...
Raghavan Raman, Jisheng Zhao, Vivek Sarkar, Martin...