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BMCBI
2010
175views more  BMCBI 2010»
15 years 7 months ago
Calibur: a tool for clustering large numbers of protein decoys
Background: Ab initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. The decoy with the most number of neighbors of...
Shuai Cheng Li, Yen Kaow Ng
BMCBI
2007
143views more  BMCBI 2007»
15 years 7 months ago
An adaptive bin framework search method for a beta-sheet protein homopolymer model
Background: The problem of protein structure prediction consists of predicting the functional or native structure of a protein given its linear sequence of amino acids. This probl...
Alena Shmygelska, Holger H. Hoos
BMCBI
2007
144views more  BMCBI 2007»
15 years 7 months ago
Application of amino acid occurrence for discriminating different folding types of globular proteins
Background: Predicting the three-dimensional structure of a protein from its amino acid sequence is a long-standing goal in computational/molecular biology. The discrimination of ...
Y.-h. Taguchi, M. Michael Gromiha
CVPR
2012
IEEE
13 years 9 months ago
Complex loss optimization via dual decomposition
We describe a novel max-margin parameter learning approach for structured prediction problems under certain non-decomposable performance measures. Structured prediction is a commo...
Mani Ranjbar, Arash Vahdat, Greg Mori
MICRO
2007
IEEE
79views Hardware» more  MICRO 2007»
16 years 1 months ago
Self-calibrating Online Wearout Detection
Technology scaling, characterized by decreasing feature size, thinning gate oxide, and non-ideal voltage scaling, will become a major hindrance to microprocessor reliability in fu...
Jason A. Blome, Shuguang Feng, Shantanu Gupta, Sco...